Publications
Research articles- Kruse, U. et al. Chemical and pathway proteomics: Powerful tools for oncology drug discovery and personalized health care. Mol Cell Proteomics 2008 Aug 1. [Epub ahead of print] [+]
- Bantscheff, M. et al. Robust and sensitive iTRAQ quantification on an LTQOrbitrap mass spectrometer. Mol Cell Proteomics 2008 Jun 10. [Epub ahead of print] [+]
- Bantscheff, M. et al. Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors. Nature Biotechnology 25, 1035-1044 (2007) [+]
- Gavin, A.C. et al. Proteome survey reveals modularity of the yeast cell machinery. Nature 440, 631-636 (2006) [+]
- Bouwmeester, T. et al. A physical and functional map of the human TNF-α/NF-κB signal transduction pathway. Nature Cell Biology 6, 97-105 (2004) [+]
- Gavin, A.C. et al. Functional Organization of the Yeast Proteome by Systematic Analysis of Protein Complexes. Nature 415, 141-147 (2002) [+]
- Rigaut. G. et al. A generic protein purification method for protein complex characterization and proteome exploration. Nature Biotechnology 17, 1030-1032 (1999) [+]
- Mallick, P. et al. Computational prediction of proteotypic peptides for quantitative proteomics. Nature Biotechnology 25, 125-131 (2007) [+]
- Angrand, P.O. et al. Transgenic mouse proteomics identifies new 14-3-3 associated proteins involved in cytoskeletal rearrangements and cell signaling. Molecular & Cellular Proteomics 5, 2211-2227 (2006) [+]
- Chen, Y.M. et al. Microtubule affinity-regulating kinase 2 functions downstream of the PAR-3/PAR-6/atypical PKC complex in regulating hippocampal neuronal polarity. Proc. Natl Acad. Sci. USA 103; 8534-8539 (2006) [+]
- Mukherjee, A. et al. Regulation of Notch signalling by non-visual beta-arrestin. Nature Cell Biology 7, 1191-1201 (2005) [+]
- Gagneur J. et al. Modular decomposition of protein-protein interaction networks. Genome Biology 5, R57 (2004) [+]
- Aloy, P. et al. Structure-Based Assembly of Protein Complexes in Yeast. Science 303, 2026-2029 (2004) [+]
- Bantscheff M., Dümpelfeld B., Kuster B. Femtomol sensitivity post-digest 18O labeling for relative quantification of differential protein complex composition. Rapid Communications in Mass Spectrometry 18, 869-876 (2004) [+]
- Trinczek B. et al. MARK4 is a novel microtubule-associated proteins/microtubule affinity-regulating kinase that binds to the cellular microtubule network and to centrosomes. Journal of Biological Chemistry 279, 5915-5923 (2004) [+]
- Drewes G., Nurse P. The protein kinase kin1, the fission yeast orthologue of mammalian MARK/PAR-1, localises to new cell ends after mitosis and is important for bipolar growth. FEBS Letters 554, 45-49 (2003) [+]
- Schirle, M., Heurtier, M.A., Kuster, B. Profiling Core Proteomes of Human Cell Lines by One-dimensional PAGE and Liquid Chromatography-Tandem Mass Spectrometry. Molecular & Cellular Proteomics 2, 1297-305 (2003) [+]
- Brajenovic, M. et al. Comprehensive proteomic analysis of human Par protein complexes reveals an interconnected protein network. Journal of Biological Chemistry 279, 12804-12811 (2004) [+]
- Aloy, P. et al. A Complex prediction: three-dimensional model of the yeast exosome. EMBO reports 3, 628-635 (2002) [+]
- Grandi, P. et al. 90S Pre-Ribosomes Include the 35S Pre-rRNA, the U3 snoRNP and 40S Subunit Processing Factors but Predominately Lack 60S Synthesis Factors. Molecular Cell 10, 105-115 (2002) [+]
- Puntervoll, P. et al. ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research 31, 3625-1630 (2003) [+]
- Bantscheff, M., Dümpelfeld, B., Küster, B. An Improved Two-Step Calibration Method for Matix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectra for Proteomics. Letter to the Editor. Rapid Communications in Mass Spectrometry 16, 1892-1895 (2002). [+]
- Gagneur, J., Jackson, D., Casari, G. Hierarchical analysis of dependency in metabolic networks. Bioinformatics 19, 1027-1034 (2003) [+]
- Reina, J. et al. Computer-Aided Design of a PDZ Domain to Recognise New Target Sequences. Nature Structural & Molecular Biology 9, 621-627 (2002) [+]
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